Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Rhynchomeles prattorum (Seram bandicoot)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Peramelemorphia; Peroryctidae; Rhynchomeles

Attributes

geographic location	Indonesia
investigation type	phylogenetic study
sample name	52886
sex	male
tissue	skin
BPA_library_ID	52886
BPA_sample_ID	40264
CALLABLE	1058988
DNA extraction method	Qiagen DNEasy modified for trace samples
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:27Z
ENA-LAST-UPDATE	2020-09-25T00:34:49Z
External Id	SAMEA7321036
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:27Z
INSDC last update	2020-09-25T00:34:49Z
INSDC status	public
LOW_COVERAGE	42567
NO_COVERAGE	227
ReadLength	100bp
Submitter Id	52886
TCCP_ID	52886_AH5VVVBCX2_TCAGCTT_S65
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	Seram bandicoot
decimal_latitude	-5.75
decimal_longitude	105.8
depthmean	81.86
depthmedian	60
family	Peroryctidae
genus	Rhynchomeles
geographic location (region and locality)	Maluku Province
institution_name	Australian Museum
location_text	Seram Island, Mount Manusela
order	Peramelemorphia
phylum	Chordata
scientific_name	Rhynchomeles prattorum
sequencing method	Illumina SBS, short PE reads
species	prattorum
state_or_region	Maluku Province
tissue_number	AM M.29415
tissue_preservation	dried
totalmapped2tgt	0.5596
totalpaired	0.5486
totalreadsstart	1954715
voucher_number	AM M.29415
voucher_or_tissue_number	AM M.29415