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Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Identifiers
BioSample: SAMEA7321032; SRA: ERS5079568
Organism
Ningaui ridei (Wongai ningaui)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Ningaui
Attributes
geographic locationAustralia
investigation typephylogenetic study
sample name52724
sexnot determined
tissueliver
AtlasLivingAustraliahttps://biocache.ala.org.au/occurrences/4ad226b0-677e-4852-a442-bcd7755c6688
BPA_library_ID52724
BPA_sample_ID40093
CALLABLE168781
DNA extraction methodsalting out
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2021-01-05T04:27:30Z
ENA-LAST-UPDATE2020-09-25T00:34:41Z
External IdSAMEA7321032
INSDC center nameAUSTRALIAN NATIONAL UNIVERSITY
INSDC first public2021-01-05T04:27:30Z
INSDC last update2020-09-25T00:34:41Z
INSDC statuspublic
LOW_COVERAGE39254
NO_COVERAGE203
ReadLength100bp
Submitter Id52724
TCCP_ID52724_BHLFLYBCXY_GATCTCG_S25
bioproject_accessionPRJEB39788
classMammalia
collectionMammal
common nameWongai ningaui
decimal_latitude-29.26
decimal_longitude130.21
depthmean65.4
depthmedian13
familyDasyuridae
genusNingaui
geographic location (region and locality)South Australia
institution_nameAustralian Biological Tissue Collection, South Australian Museum
location_textGreat Victoria Desert, near Oak Valley, 53.3 km WNW, site code WYO00601
orderDasyuromorphia
phylumChordata
scientific_nameNingaui ridei
sequencing methodIllumina SBS, short PE reads
speciesridei
state_or_regionSouth Australia
tissue_numberABTC80663
tissue_preservationfrozen
totalmapped2tgt0.2343
totalpaired0.1687
totalreadsstart715731
voucher_numberSAMA M22885
voucher_or_tissue_numberSAMA M22885
wild_captivewild
BioProject
PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project

Submission
EBI; 2021-01-06
Accession:
SAMEA7321032
ID:
17239489

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