Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Lagorchestes hirsutus (rufous hare-wallaby)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Lagorchestes

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	40107
sex	male
tissue	muscle
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/cb25d7f9-c029-431b-adb5-9a7965588c1c
BPA_library_ID	52738
BPA_sample_ID	40107
CALLABLE	1326081
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:28Z
ENA-LAST-UPDATE	2020-09-25T00:34:06Z
External Id	SAMEA7321013
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:28Z
INSDC last update	2020-09-25T00:34:06Z
INSDC status	public
LOW_COVERAGE	94785
NO_COVERAGE	77
ReadLength	100bp
Submitter Id	40107
TCCP_ID	40107_LANES3
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	rufous hare-wallaby
decimal_latitude	-20.83
decimal_longitude	130.34
depthmean	277.47
depthmedian	139
family	Macropodidae
genus	Lagorchestes
geographic location (region and locality)	Northern Territory
institution_name	Australian Museum
location_text	Sangster's Bore, Tanami Desert
order	Diprotodontia
phylum	Chordata
scientific_name	Lagorchestes hirsutus
sequencing method	Illumina SBS, short PE reads
species	hirsutus
state_or_region	Northern Territory
tissue_number	EBU26594
tissue_preservation	frozen
totalmapped2tgt	0.4531
totalpaired	0.362
totalreadsstart	9993292
voucher_number	AM M.27335.001
voucher_or_tissue_number	AM M.27335.001