Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Organism: Parantechinus apicalis (southern dibbler)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Parantechinus

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	40089
sex	not determined
tissue	heart \| kidney \| liver \| muscle structure
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/442c68e4-51a9-42f2-904e-caa6a7b1c5bf
BPA_library_ID	52720
BPA_sample_ID	40089
CALLABLE	450519
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:28Z
ENA-LAST-UPDATE	2020-09-25T00:33:36Z
External Id	SAMEA7320998
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:28Z
INSDC last update	2020-09-25T00:33:36Z
INSDC status	public
LOW_COVERAGE	53312
NO_COVERAGE	152
ReadLength	100bp
Submitter Id	40089
TCCP_ID	40089_LANES3
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	southern dibbler
depthmean	55.01
depthmedian	20
family	Dasyuridae
genus	Parantechinus
geographic location (region and locality)	Western Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Jerramungup
order	Dasyuromorphia
phylum	Chordata
scientific_name	Parantechinus apicalis
sequencing method	Illumina SBS, short PE reads
species	apicalis
state_or_region	Western Australia
tissue_number	ABTC07518
tissue_preservation	frozen
totalmapped2tgt	0.2353
totalpaired	0.1866
totalreadsstart	1968489
voucher_number	WAM M24939
voucher_or_tissue_number	WAM M24939
wild_captive	wild