Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Perameles bougainville (western barred bandicoot)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Peramelemorphia; Peramelidae; Perameles

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	40070
sex	not determined
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/4a3bb095-7c8d-41ad-96eb-c3a1451598c3
BPA_library_ID	52701
BPA_sample_ID	40070
CALLABLE	1230612
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:28Z
ENA-LAST-UPDATE	2020-09-25T00:33:03Z
External Id	SAMEA7320982
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:28Z
INSDC last update	2020-09-25T00:33:03Z
INSDC status	public
LOW_COVERAGE	70421
NO_COVERAGE	81
ReadLength	100bp
Submitter Id	40070
TCCP_ID	40070_LANES3
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	western barred bandicoot
depthmean	127.38
depthmedian	85
family	Peramelidae
genus	Perameles
geographic location (region and locality)	Western Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Bernier Island
order	Peramelemorphia
phylum	Chordata
scientific_name	Perameles bougainville
sequencing method	Illumina SBS, short PE reads
species	bougainville
state_or_region	Western Australia
tissue_number	ABTC10628
tissue_preservation	frozen
totalmapped2tgt	0.4164
totalpaired	0.3233
totalreadsstart	4650444
voucher_number	no voucher
voucher_or_tissue_number	ABTC10628