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Human gut genome

Identifiers
BioSample: SAMEA5852619; SRA: ERS3641144
Organism
uncultured Clostridium sp.
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationUSA
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-03114
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:50Z
ENA-LAST-UPDATE2019-08-09T12:56:19Z
External IdSAMEA5852619
INSDC center nameEMG
INSDC first public2019-08-06T09:56:50Z
INSDC last update2019-08-09T12:56:19Z
INSDC statuspublic
Submitter IdMGYG-HGUT-03114
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Clostridium sp.
completeness score98.39
contamination score2.35
metagenomic sourcehuman gut metagenome
sample derived fromSRS2455715
scientific_nameuncultured Clostridium sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5852619
ID:
12521616

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