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Candidatus Nomurabacteria bacterium

Identifiers
BioSample: SAMEA14306468; SRA: ERS11897785
Organism
Candidatus Nomurabacteria bacterium
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Patescibacteria group; Parcubacteria group; Candidatus Nomurabacteria; unclassified Candidatus Nomurabacteria
Attributes
collection date2016-08-15
broad-scale environmental contextfreshwater lake
local-scale environmental contextreservoir
environmental mediumfresh water
geographic locationCzech Republic
investigation typemetagenome-assembled genome
isolation sourceFreshwater lake
project namePRJEB35770
sample nameRH-15aug16-101
ENA-CHECKLISTERC000047
ENA-FIRST-PUBLIC2022-06-30
ENA-LAST-UPDATE2022-06-30
External IdSAMEA14306468
INSDC center aliasBIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC center nameBIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC first public2022-06-30T00:19:14Z
INSDC last update2022-06-30T00:19:14Z
INSDC statuspublic
Submitter IdRH-15aug16-101
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwareMEGAHIT; kmer set 29,49,69,89,109,119,129,149
binning parameterscoverage and kmer
binning softwareMetaBAT2
completeness score47.76
completeness softwarecheckm
contamination score3.45
geographic location (latitude)48.846361
geographic location (longitude)14.487639
metagenomic sourcefreshwater metagenome
sample derived fromERS4146219
sequencing methodIllumina HiSeq 4000
taxonomic identity markermulti-marker approach
Description

Patescibacteria assembled from Rimov Reservoir

BioProject
PRJEB35640 Freshwater metagenomes from different European and Asian lakes
Retrieve all samples from this project

Submission
EBI; 2022-07-01
Accession:
SAMEA14306468
ID:
29454893

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