Candidatus Peribacteria bacterium

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Result Filters

Organism: Candidatus Peribacteria bacterium
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Candidatus Peregrinibacteria; Candidatus Peribacteria; unclassified Candidatus Peribacteria

Attributes

collection date	2019-10-09
broad-scale environmental context	freshwater lake
local-scale environmental context	lake
environmental medium	fresh water
geographic location	Switzerland
investigation type	metagenome-assembled genome
isolation source	Freshwater lake
project name	PRJEB35770
sample name	CH-Oct18-39
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2022-06-30
ENA-LAST-UPDATE	2022-06-30
External Id	SAMEA14306355
INSDC center alias	BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC center name	BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC first public	2022-06-30T00:19:15Z
INSDC last update	2022-06-30T00:19:15Z
INSDC status	public
Submitter Id	CH-Oct18-39
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	MEGAHIT; kmer set 29,49,69,89,109,119,129,149
binning parameters	coverage and kmer
binning software	MetaBAT2
completeness score	71.71
completeness software	checkm
contamination score	0.93
geographic location (latitude)	47.633333
geographic location (longitude)	9.366667
metagenomic source	freshwater metagenome
sample derived from	ERS4409421
sequencing method	Illumina NovaSeq 6000
taxonomic identity marker	multi-marker approach