CME25A7881262_1.fastq.gz

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Result Filters

Organism: Callithrix jacchus (white-tufted-ear marmoset)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix

Attributes

age	embryo
cell type	ExMes
collection date	not collected
development stage	E15
genotype	wild type genotype
geographic location	not collected
isolate	not applicable
tissue	embryonic tissue
sample name	E-MTAB-13893:CME25A7881262_1.fastq.gz
sex	unknown
ENA first public	2024-09-22
ENA-CHECKLIST	ERC000011
INSDC center name	Cambridge University, Department of Physiology, Development and Neuroscience and Cambridge Stem Cell Institute
INSDC status	public
Submitter Id	E-MTAB-13893:CME25A7881262_1.fastq.gz
broker name	ArrayExpress
common name	white-tufted-ear marmoset
corresponding transcriptomic id	CME25A7812677
cpg in cg context	76.8
individual	E15B
mapping efficiency	4.05
qc	0
scientific_name	Callithrix jacchus

Description: Protocols: Single cell or near single cell genome bisulfite sequencing was conducted on postimplantation embryos following laser capture micro-dissection. Single cell bisulfites sequencing was conducted on pre-implantation following isolation via mouth pipetting. Genomic DNA was extracted using a Monarch Genomic DNA Purification Kit (NEB). Standard library construction protocols were used.