Metagenome-assembled genome: SRR17458632_metabat2_... - BioSample

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMEA115104851; Sample name: SRR17458632_metabat2_4_1705322968; SRA: ERS17740568

Organism: uncultured Rhodobacterales bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; environmental samples

Attributes

broad-scale environmental context	water
collection date	2017-03-23
geographic location	Atlantic Ocean
environmental medium	plastisphere
investigation type	metagenome-assembled genome
project name	NextSeq 500 sequencing: Metagenomic analyses of Mature Plastic Biofilm
isolation source	plastisphere metagenome
assembly software	metaspades_v3.15.3
sample derived from	SAMN24661225
geographic location (longitude)	-66.35 DD
binning parameters	default
contamination score	1.09 %
ENA-FIRST-PUBLIC	2024-01-15T16:34:32Z
ENA-LAST-UPDATE	2024-01-15T16:34:32Z
completeness software	CheckM2_v1.0.1
binning software	MGnify-genomes-generation-pipeline_v1.0.0
organism	uncultured Rhodobacterales bacterium
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
taxonomic identity marker	multi-marker approach
completeness score	99.16 %
geographic location (latitude)	24.95 DD
scientific_name	uncultured Rhodobacterales bacterium
local environmental context	sea
metagenomic source	plastisphere metagenome
sequencing method	NextSeq 500
ENA-FIRST-PUBLIC	2024-01-15
ENA-LAST-UPDATE	2024-01-15