MAG for uncultured Sphingobacteriaceae bacterium

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Result Filters

Organism: uncultured Sphingobacteriaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; environmental samples

Attributes

broad-scale environmental context	Grassland formations
collection date	2022-06-15
environmental medium	not collected
geographic location	Denmark
isolation source	soil
project name	Microflora Danica
sample name	MFD10113.bin.3.134
ENA first public	2024-12-25
ENA-CHECKLIST	ERC000011
External Id	SAMEA114835581
INSDC center name	Center for Microbial Communities
INSDC last update	2023-12-07T10:00:33Z
INSDC status	public
Submitter Id	MFD10113.bin.3.134
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parameters	Ensemble iterative binning using coverage and kmer
binning software	MetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score	52.15
completeness software	CheckM2
contamination score	3.42
geographic location (latitude)	56.22162665
geographic location (longitude)	10.53657601
local environmental context	Semi-natural dry grasslands
metagenomic source	soil metagenome
sample derived from	ERS16252373
scientific_name	uncultured Sphingobacteriaceae bacterium
taxonomic identity marker	multi-marker approach

Description: MQ MAG for uncultured Sphingobacteriaceae bacterium, recovered from an environmental sample from Denmark

BioProject: PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project