MAG for uncultured proteobacterium

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Result Filters

Organism: uncultured Pseudomonadota bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; environmental samples

Attributes

broad-scale environmental context	Dunes
collection date	2020-08-23
environmental medium	not collected
geographic location	Denmark
isolation source	soil
project name	Microflora Danica
sample name	MFD10064.bin.1.20
ENA first public	2024-12-25
ENA-CHECKLIST	ERC000011
External Id	SAMEA114834765
INSDC center name	Center for Microbial Communities
INSDC last update	2023-12-07T10:00:31Z
INSDC status	public
Submitter Id	MFD10064.bin.1.20
assembly quality	Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
binning parameters	Ensemble iterative binning using coverage and kmer
binning software	MetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score	96.63
completeness software	CheckM2
contamination score	0.43
geographic location (latitude)	56.91759
geographic location (longitude)	8.42712
local environmental context	Sea dunes
metagenomic source	soil metagenome
sample derived from	ERS14381610
scientific_name	uncultured proteobacterium
taxonomic identity marker	multi-marker approach