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MAG for uncultured Solirubrobacterales bacterium

Identifiers
BioSample: SAMEA114834316; SRA: ERS17259183
Organism
uncultured Solirubrobacterales bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Thermoleophilia; Solirubrobacterales; environmental samples
Attributes
broad-scale environmental contextFreshwater
collection date2021-11-05
environmental mediumnot collected
geographic locationDenmark
isolation sourcesediment
project nameMicroflora Danica
sample nameMFD10007.bin.1.200
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114834316
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:29Z
INSDC statuspublic
Submitter IdMFD10007.bin.1.200
assembly qualityMultiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score94.57
completeness softwareCheckM2
contamination score2.16
geographic location (latitude)55.8579
geographic location (longitude)12.4931
local environmental contextStanding freshwater
metagenomic sourcesediment metagenome
sample derived fromERS15928292
scientific_nameuncultured Solirubrobacterales bacterium
taxonomic identity markermulti-marker approach
Description

HQ MAG for uncultured Solirubrobacterales bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114834316
ID:
45979196

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