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MAG for uncultured Chloroflexia bacterium

Identifiers
BioSample: SAMEA114833331; SRA: ERS17258198
Organism
uncultured Chloroflexia bacterium
cellular organisms; Bacteria; Bacillati; Chloroflexota; Chloroflexia; environmental samples
Attributes
broad-scale environmental contextFreshwater
collection date2022-04-21
environmental mediumnot collected
geographic locationDenmark
isolation sourcesediment
project nameMicroflora Danica
sample nameMFD09848.bin.2.54
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114833331
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:26Z
INSDC statuspublic
Submitter IdMFD09848.bin.2.54
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score82.35
completeness softwareCheckM2
contamination score4.06
geographic location (latitude)55.4573
geographic location (longitude)12.025
local environmental contextStanding freshwater
metagenomic sourcesediment metagenome
sample derived fromERS15928291
scientific_nameuncultured Chloroflexia bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Chloroflexia bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114833331
ID:
45979268

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