U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MAG for uncultured Gammaproteobacteria bacterium

Identifiers
BioSample: SAMEA114832707; SRA: ERS17257574
Organism
uncultured Gammaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; environmental samples
Attributes
broad-scale environmental contextSaltwater
collection date2022-02-24
environmental mediumnot collected
geographic locationDenmark
isolation sourcesediment
project nameMicroflora Danica
sample nameMFD09779.bin.1.73
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114832707
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:25Z
INSDC statuspublic
Submitter IdMFD09779.bin.1.73
assembly qualityMultiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score95.23
completeness softwareCheckM2
contamination score0
geographic location (latitude)56.3361
geographic location (longitude)8.1689
local environmental contextFjords
metagenomic sourcesediment metagenome
sample derived fromERS16252371
scientific_nameuncultured Gammaproteobacteria bacterium
taxonomic identity markermulti-marker approach
Description

HQ MAG for uncultured Gammaproteobacteria bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114832707
ID:
45973894

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center