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MAG for uncultured Thermoleophilia bacterium

Identifiers
BioSample: SAMEA114832514; SRA: ERS17257381
Organism
uncultured Thermoleophilia bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Thermoleophilia; environmental samples
Attributes
broad-scale environmental contextSaltwater
collection date2022-02-24
environmental mediumnot collected
geographic locationDenmark
isolation sourcesediment
project nameMicroflora Danica
sample nameMFD09779.bin.1.235
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114832514
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:24Z
INSDC statuspublic
Submitter IdMFD09779.bin.1.235
assembly qualityMultiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score96.52
completeness softwareCheckM2
contamination score1.87
geographic location (latitude)56.3361
geographic location (longitude)8.1689
local environmental contextFjords
metagenomic sourcesediment metagenome
sample derived fromERS16252371
scientific_nameuncultured Thermoleophilia bacterium
taxonomic identity markermulti-marker approach
Description

HQ MAG for uncultured Thermoleophilia bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114832514
ID:
45975028

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