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MAG for uncultured Acidobacteriota bacterium

Identifiers
BioSample: SAMEA114832214; SRA: ERS17257081
Organism
uncultured Acidobacteriota bacterium
cellular organisms; Bacteria; Pseudomonadati; Acidobacteriota; environmental samples
Attributes
broad-scale environmental contextFreshwater
collection date2022-04-20
environmental mediumnot collected
geographic locationDenmark
isolation sourcesediment
project nameMicroflora Danica
sample nameMFD09730.bin.2.148
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114832214
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:23Z
INSDC statuspublic
Submitter IdMFD09730.bin.2.148
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score54.14
completeness softwareCheckM2
contamination score3.72
geographic location (latitude)55.5412
geographic location (longitude)12.0297
local environmental contextStanding freshwater
metagenomic sourcesediment metagenome
sample derived fromERS15928290
scientific_nameuncultured Acidobacteriota bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Acidobacteriota bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114832214
ID:
45971706

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