U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MAG for uncultured Actinomycetota bacterium

Identifiers
BioSample: SAMEA114831663; SRA: ERS17256530
Organism
uncultured Actinomycetota bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; environmental samples
Attributes
broad-scale environmental contextDunes
collection date2021-09-30
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD09671.bin.1.189
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114831663
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:22Z
INSDC statuspublic
Submitter IdMFD09671.bin.1.189
assembly qualityMultiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score97.37
completeness softwareCheckM2
contamination score1.53
geographic location (latitude)54.9903
geographic location (longitude)15.0788
local environmental contextSea dunes
metagenomic sourcesoil metagenome
sample derived fromERS14381667
scientific_nameuncultured Actinomycetota bacterium
taxonomic identity markermulti-marker approach
Description

HQ MAG for uncultured Actinomycetota bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114831663
ID:
45974353

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center