MAG for uncultured Alphaproteobacteria bacterium

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Result Filters

Organism: uncultured Alphaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; environmental samples

Attributes

broad-scale environmental context	Rocky habitats and caves
collection date	2021-09-27
environmental medium	not collected
geographic location	Denmark
isolation source	soil
project name	Microflora Danica
sample name	MFD09603.bin.c.1
ENA first public	2024-12-25
ENA-CHECKLIST	ERC000011
External Id	SAMEA114831585
INSDC center name	Center for Microbial Communities
INSDC last update	2023-12-07T10:00:22Z
INSDC status	public
Submitter Id	MFD09603.bin.c.1
assembly quality	Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
binning parameters	Ensemble iterative binning using coverage and kmer
binning software	MetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score	100
completeness software	CheckM2
contamination score	2.44
geographic location (latitude)	55.2067
geographic location (longitude)	14.9796
local environmental context	Rocky slopes with vegetation
metagenomic source	soil metagenome
sample derived from	ERS14381674
scientific_name	uncultured Alphaproteobacteria bacterium
taxonomic identity marker	multi-marker approach