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MAG for uncultured Acidobacteriota bacterium

Identifiers
BioSample: SAMEA114829594; SRA: ERS17254461
Organism
uncultured Acidobacteriota bacterium
cellular organisms; Bacteria; Pseudomonadati; Acidobacteriota; environmental samples
Attributes
broad-scale environmental contextDunes
collection date2020-08-23
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD09286.bin.2.146
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114829594
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:16Z
INSDC statuspublic
Submitter IdMFD09286.bin.2.146
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score57.41
completeness softwareCheckM2
contamination score1.6
geographic location (latitude)56.81197
geographic location (longitude)8.26815
local environmental contextSea dunes
metagenomic sourcesoil metagenome
sample derived fromERS14381704
scientific_nameuncultured Acidobacteriota bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Acidobacteriota bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114829594
ID:
45983680

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