MAG for uncultured Alicyclobacillaceae bacterium

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Organism: uncultured Alicyclobacillaceae bacterium
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Alicyclobacillaceae; environmental samples

Attributes

broad-scale environmental context	Temperate heath and scrub
collection date	2020-08-05
environmental medium	not collected
geographic location	Denmark
isolation source	soil
project name	Microflora Danica
sample name	MFD09222.bin.3.213
ENA first public	2024-12-25
ENA-CHECKLIST	ERC000011
External Id	SAMEA114828906
INSDC center name	Center for Microbial Communities
INSDC last update	2023-12-07T10:00:15Z
INSDC status	public
Submitter Id	MFD09222.bin.3.213
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parameters	Ensemble iterative binning using coverage and kmer
binning software	MetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score	65.68
completeness software	CheckM2
contamination score	2.43
geographic location (latitude)	56.2643
geographic location (longitude)	9.2476
local environmental context	Temperate heath
metagenomic source	soil metagenome
sample derived from	ERS15928288
scientific_name	uncultured Alicyclobacillaceae bacterium
taxonomic identity marker	multi-marker approach

Description: MQ MAG for uncultured Alicyclobacillaceae bacterium, recovered from an environmental sample from Denmark

BioProject: PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project