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MAG for uncultured Acidobacteriota bacterium

Identifiers
BioSample: SAMEA114828874; SRA: ERS17253741
Organism
uncultured Acidobacteriota bacterium
cellular organisms; Bacteria; Pseudomonadati; Acidobacteriota; environmental samples
Attributes
broad-scale environmental contextTemperate heath and scrub
collection date2020-08-05
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD09222.bin.2.82
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114828874
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:15Z
INSDC statuspublic
Submitter IdMFD09222.bin.2.82
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score79.38
completeness softwareCheckM2
contamination score0.02
geographic location (latitude)56.2643
geographic location (longitude)9.2476
local environmental contextTemperate heath
metagenomic sourcesoil metagenome
sample derived fromERS15928288
scientific_nameuncultured Acidobacteriota bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Acidobacteriota bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114828874
ID:
45976699

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