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MAG for uncultured Alphaproteobacteria bacterium

Identifiers
BioSample: SAMEA114828124; SRA: ERS17252991
Organism
uncultured Alphaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; environmental samples
Attributes
broad-scale environmental contextGrassland formations
collection date2020-08-03
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD09206.bin.2.96
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114828124
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:13Z
INSDC statuspublic
Submitter IdMFD09206.bin.2.96
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score78.59
completeness softwareCheckM2
contamination score3.84
geographic location (latitude)56.90236
geographic location (longitude)10.25672
local environmental contextNatural grasslands
metagenomic sourcesoil metagenome
sample derived fromERS14381702
scientific_nameuncultured Alphaproteobacteria bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Alphaproteobacteria bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114828124
ID:
45987290

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