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MAG for uncultured Gaiellaceae bacterium

Identifiers
BioSample: SAMEA114828074; SRA: ERS17252941
Organism
uncultured Gaiellaceae bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Thermoleophilia; Gaiellales; Gaiellaceae; environmental samples
Attributes
broad-scale environmental contextGrassland formations
collection date2020-08-03
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD09206.bin.2.203
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114828074
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:12Z
INSDC statuspublic
Submitter IdMFD09206.bin.2.203
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score73.81
completeness softwareCheckM2
contamination score3.75
geographic location (latitude)56.90236
geographic location (longitude)10.25672
local environmental contextNatural grasslands
metagenomic sourcesoil metagenome
sample derived fromERS14381702
scientific_nameuncultured Gaiellaceae bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Gaiellaceae bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114828074
ID:
45973721

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