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MAG for uncultured Actinomycetota bacterium

Identifiers
BioSample: SAMEA114827840; SRA: ERS17252707
Organism
uncultured Actinomycetota bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; environmental samples
Attributes
broad-scale environmental contextFields
collection date2020-09-10
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD09018.bin.2.22
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114827840
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:12Z
INSDC statuspublic
Submitter IdMFD09018.bin.2.22
assembly qualityMultiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score90.75
completeness softwareCheckM2
contamination score3.15
geographic location (latitude)56.34373946
geographic location (longitude)10.21337016
local environmental contextMalvids
metagenomic sourcesoil metagenome
sample derived fromERS14381642
scientific_nameuncultured Actinomycetota bacterium
taxonomic identity markermulti-marker approach
Description

HQ MAG for uncultured Actinomycetota bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114827840
ID:
45983505

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