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MAG for uncultured archaeon

Identifiers
BioSample: SAMEA114827597; SRA: ERS17252464
Organism
uncultured archaeon
cellular organisms; Archaea; environmental samples
Attributes
broad-scale environmental contextFields
collection date2020-03-25
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD08669.bin.2.2
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114827597
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:11Z
INSDC statuspublic
Submitter IdMFD08669.bin.2.2
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score56.36
completeness softwareCheckM2
contamination score0.49
geographic location (latitude)55.45114444
geographic location (longitude)8.920947061
local environmental contextPoales, Cereal
metagenomic sourcesoil metagenome
sample derived fromERS14381644
scientific_nameuncultured archaeon
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured archaeon, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114827597
ID:
45971669

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