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MAG for uncultured Nitrospiraceae bacterium

Identifiers
BioSample: SAMEA114827552; SRA: ERS17252419
Organism
uncultured Nitrospiraceae bacterium
cellular organisms; Bacteria; Pseudomonadati; Nitrospirota; Nitrospiria; Nitrospirales; Nitrospiraceae; environmental samples
Attributes
broad-scale environmental contextFields
collection date2020-11-03
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD08497.bin.2.96
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114827552
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:11Z
INSDC statuspublic
Submitter IdMFD08497.bin.2.96
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score92.43
completeness softwareCheckM2
contamination score5.43
geographic location (latitude)57.06619413
geographic location (longitude)9.742093554
local environmental contextPoales, Cereal
metagenomic sourcesoil metagenome
sample derived fromERS14381699
scientific_nameuncultured Nitrospiraceae bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Nitrospiraceae bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114827552
ID:
45975368

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