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MAG for uncultured Actinomycetota bacterium

Identifiers
BioSample: SAMEA114827045; SRA: ERS17251912
Organism
uncultured Actinomycetota bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; environmental samples
Attributes
broad-scale environmental contextForests
collection date2021-07-26
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD06742.bin.1.53
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114827045
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:09Z
INSDC statuspublic
Submitter IdMFD06742.bin.1.53
assembly qualityMultiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score98.02
completeness softwareCheckM2
contamination score4.71
geographic location (latitude)54.992122
geographic location (longitude)12.534405
local environmental contextTemperate forests
metagenomic sourcesoil metagenome
sample derived fromERS15928287
scientific_nameuncultured Actinomycetota bacterium
taxonomic identity markermulti-marker approach
Description

HQ MAG for uncultured Actinomycetota bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114827045
ID:
45976192

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