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MAG for uncultured Actinomycetota bacterium

Identifiers
BioSample: SAMEA114826885; SRA: ERS17251752
Organism
uncultured Actinomycetota bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; environmental samples
Attributes
broad-scale environmental contextDunes
collection date2021-07-19
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD06714.bin.2.140
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114826885
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:08Z
INSDC statuspublic
Submitter IdMFD06714.bin.2.140
assembly qualityMultiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score90.23
completeness softwareCheckM2
contamination score1.43
geographic location (latitude)55.207112
geographic location (longitude)9.988333
local environmental contextSea dunes
metagenomic sourcesoil metagenome
sample derived fromERS16252368
scientific_nameuncultured Actinomycetota bacterium
taxonomic identity markermulti-marker approach
Description

HQ MAG for uncultured Actinomycetota bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114826885
ID:
45971685

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