MAG for uncultured proteobacterium

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Result Filters

Organism: uncultured Pseudomonadota bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; environmental samples

Attributes

broad-scale environmental context	Grassland formations
collection date	2022-04-04
environmental medium	not collected
geographic location	Denmark
isolation source	soil
project name	Microflora Danica
sample name	MFD06526.bin.2.101
ENA first public	2024-12-25
ENA-CHECKLIST	ERC000011
External Id	SAMEA114826704
INSDC center name	Center for Microbial Communities
INSDC last update	2023-12-07T10:00:07Z
INSDC status	public
Submitter Id	MFD06526.bin.2.101
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parameters	Ensemble iterative binning using coverage and kmer
binning software	MetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score	77.05
completeness software	CheckM2
contamination score	2.88
geographic location (latitude)	56.28098028
geographic location (longitude)	8.46523762
local environmental context	Semi-natural dry grasslands
metagenomic source	soil metagenome
sample derived from	ERS16252367
scientific_name	uncultured proteobacterium
taxonomic identity marker	multi-marker approach

Description: MQ MAG for uncultured proteobacterium, recovered from an environmental sample from Denmark

BioProject: PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
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