MAG for uncultured Candidatus Saccharibacteria bac... - BioSample

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Result Filters

Organism: uncultured Candidatus Saccharibacteria bacterium
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Candidatus Saccharibacteria; environmental samples

Attributes

broad-scale environmental context	Freshwater
collection date	2022-04-29
environmental medium	not collected
geographic location	Denmark
isolation source	sediment
project name	Microflora Danica
sample name	MFD06435.bin.1.175
ENA first public	2024-12-25
ENA-CHECKLIST	ERC000011
External Id	SAMEA114826507
INSDC center name	Center for Microbial Communities
INSDC last update	2023-12-07T10:00:06Z
INSDC status	public
Submitter Id	MFD06435.bin.1.175
assembly quality	Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parameters	Ensemble iterative binning using coverage and kmer
binning software	MetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score	94.56
completeness software	CheckM2
contamination score	2.61
geographic location (latitude)	57.0278885
geographic location (longitude)	8.46320698
local environmental context	Standing freshwater
metagenomic source	sediment metagenome
sample derived from	ERS15928286
scientific_name	uncultured Candidatus Saccharibacteria bacterium
taxonomic identity marker	multi-marker approach

Description: HQ MAG for uncultured Candidatus Saccharibacteria bacterium, recovered from an environmental sample from Denmark

BioProject: PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
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