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MAG for uncultured Solirubrobacteraceae bacterium

Identifiers
BioSample: SAMEA114825774; SRA: ERS17250641
Organism
uncultured Solirubrobacteraceae bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Thermoleophilia; Solirubrobacterales; Solirubrobacteraceae; environmental samples
Attributes
broad-scale environmental contextnot collected
collection date2022-02-16
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD06085.bin.1.175
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114825774
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:04Z
INSDC statuspublic
Submitter IdMFD06085.bin.1.175
assembly qualityMultiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score92.64
completeness softwareCheckM2
contamination score2.9
geographic location (latitude)56.31252593
geographic location (longitude)8.16335014
local environmental contextnot collected
metagenomic sourcesoil metagenome
sample derived fromERS16252364
scientific_nameuncultured Solirubrobacteraceae bacterium
taxonomic identity markermulti-marker approach
Description

HQ MAG for uncultured Solirubrobacteraceae bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114825774
ID:
45974716

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