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MAG for uncultured Actinomycetes bacterium

Identifiers
BioSample: SAMEA114825569; SRA: ERS17250436
Organism
uncultured Actinomycetes bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; environmental samples
Attributes
broad-scale environmental contextFields
collection date2021-07-01
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD05942.bin.2.346
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114825569
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:04Z
INSDC statuspublic
Submitter IdMFD05942.bin.2.346
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score97.53
completeness softwareCheckM2
contamination score5.02
geographic location (latitude)56.7771
geographic location (longitude)9.6177
local environmental contextPoales, grass
metagenomic sourcesoil metagenome
sample derived fromERS16252363
scientific_nameuncultured Actinomycetes bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Actinomycetes bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114825569
ID:
45985458

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