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MAG for uncultured Ignavibacteria bacterium

Identifiers
BioSample: SAMEA114825328; SRA: ERS17250195
Organism
uncultured Ignavibacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Ignavibacteriota; Ignavibacteria; environmental samples
Attributes
broad-scale environmental contextFields
collection date2021-07-01
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD05942.bin.1.56
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114825328
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:03Z
INSDC statuspublic
Submitter IdMFD05942.bin.1.56
assembly qualityMultiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score97.94
completeness softwareCheckM2
contamination score1.67
geographic location (latitude)56.7771
geographic location (longitude)9.6177
local environmental contextPoales, grass
metagenomic sourcesoil metagenome
sample derived fromERS16252363
scientific_nameuncultured Ignavibacteria bacterium
taxonomic identity markermulti-marker approach
Description

HQ MAG for uncultured Ignavibacteria bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114825328
ID:
45979005

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