U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MAG for uncultured Alphaproteobacteria bacterium

Identifiers
BioSample: SAMEA114824762; SRA: ERS17249629
Organism
uncultured Alphaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; environmental samples
Attributes
broad-scale environmental contextGrassland formations
collection date2021-09-21
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD05747.bin.2.175
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114824762
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:01Z
INSDC statuspublic
Submitter IdMFD05747.bin.2.175
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score84.46
completeness softwareCheckM2
contamination score3.34
geographic location (latitude)55.3414
geographic location (longitude)12.4445
local environmental contextSemi-natural dry grasslands
metagenomic sourcesoil metagenome
sample derived fromERS15928284
scientific_nameuncultured Alphaproteobacteria bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Alphaproteobacteria bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114824762
ID:
45973574

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center