MAG for uncultured Candidatus Saccharibacteria bac... - BioSample

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Organism: uncultured Candidatus Saccharibacteria bacterium
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Candidatus Saccharibacteria; environmental samples

Attributes

broad-scale environmental context	Coastal
collection date	2021-07-20
environmental medium	not collected
geographic location	Denmark
isolation source	soil
project name	Microflora Danica
sample name	MFD05684.bin.2.263
ENA first public	2024-12-25
ENA-CHECKLIST	ERC000011
External Id	SAMEA114824178
INSDC center name	Center for Microbial Communities
INSDC last update	2023-12-07T09:59:59Z
INSDC status	public
Submitter Id	MFD05684.bin.2.263
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parameters	Ensemble iterative binning using coverage and kmer
binning software	MetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score	86.19
completeness software	CheckM2
contamination score	1.98
geographic location (latitude)	55.5312
geographic location (longitude)	8.2638
local environmental context	Salt marshes and salt meadows
metagenomic source	soil metagenome
sample derived from	ERS14381672
scientific_name	uncultured Candidatus Saccharibacteria bacterium
taxonomic identity marker	multi-marker approach

Description: MQ MAG for uncultured Candidatus Saccharibacteria bacterium, recovered from an environmental sample from Denmark

BioProject: PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project