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MAG for uncultured Acidimicrobiaceae bacterium

Identifiers
BioSample: SAMEA114823406; SRA: ERS17248274
Organism
uncultured Acidimicrobiaceae bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; environmental samples
Attributes
broad-scale environmental contextBogs, mires and fens
collection date2021-07-27
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD05580.bin.2.14
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114823406
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:57Z
INSDC statuspublic
Submitter IdMFD05580.bin.2.14
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score85.63
completeness softwareCheckM2
contamination score0.91
geographic location (latitude)56.3838
geographic location (longitude)9.5148
local environmental contextSphagnum acid bogs
metagenomic sourcesoil metagenome
sample derived fromERS14381609
scientific_nameuncultured Acidimicrobiaceae bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Acidimicrobiaceae bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114823406
ID:
45977131

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