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MAG for Vicinamibacterales bacterium

Identifiers
BioSample: SAMEA114823289; SRA: ERS17248156
Organism
Vicinamibacterales bacterium
cellular organisms; Bacteria; Pseudomonadati; Acidobacteriota; Vicinamibacteria; Vicinamibacterales; unclassified Vicinamibacterales
Attributes
broad-scale environmental contextGrassland formations
collection date2021-09-16
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD05567.bin.2.83
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114823289
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:57Z
INSDC statuspublic
Submitter IdMFD05567.bin.2.83
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score63.26
completeness softwareCheckM2
contamination score4.35
geographic location (latitude)55.2293
geographic location (longitude)9.8535
local environmental contextSemi-natural dry grasslands
metagenomic sourcesoil metagenome
sample derived fromERS14381686
scientific_nameVicinamibacterales bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for Vicinamibacterales bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114823289
ID:
45972920

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