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MAG for uncultured Chloroflexia bacterium

Identifiers
BioSample: SAMEA114823148; SRA: ERS17248015
Organism
uncultured Chloroflexia bacterium
cellular organisms; Bacteria; Bacillati; Chloroflexota; Chloroflexia; environmental samples
Attributes
broad-scale environmental contextGrassland formations
collection date2021-09-16
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD05567.bin.1.272
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114823148
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:56Z
INSDC statuspublic
Submitter IdMFD05567.bin.1.272
assembly qualityMultiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score90.19
completeness softwareCheckM2
contamination score1.44
geographic location (latitude)55.2293
geographic location (longitude)9.8535
local environmental contextSemi-natural dry grasslands
metagenomic sourcesoil metagenome
sample derived fromERS14381686
scientific_nameuncultured Chloroflexia bacterium
taxonomic identity markermulti-marker approach
Description

HQ MAG for uncultured Chloroflexia bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114823148
ID:
45979953

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