U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MAG for uncultured Solirubrobacterales bacterium

Identifiers
BioSample: SAMEA114822604; SRA: ERS17247471
Organism
uncultured Solirubrobacterales bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Thermoleophilia; Solirubrobacterales; environmental samples
Attributes
broad-scale environmental contextForests
collection date2021-07-20
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD05513.bin.2.178
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114822604
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:55Z
INSDC statuspublic
Submitter IdMFD05513.bin.2.178
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score71.58
completeness softwareCheckM2
contamination score5.47
geographic location (latitude)55.9873
geographic location (longitude)10.1282
local environmental contextTemperate forests
metagenomic sourcesoil metagenome
sample derived fromERS16252360
scientific_nameuncultured Solirubrobacterales bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Solirubrobacterales bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114822604
ID:
45980895

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center