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MAG for uncultured Microthrixaceae bacterium

Identifiers
BioSample: SAMEA114822124; SRA: ERS17246991
Organism
uncultured Microthrixaceae bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Acidimicrobiia; Acidimicrobiales; Microthrixaceae; environmental samples
Attributes
broad-scale environmental contextTemperate heath and scrub
collection date2021-08-12
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD05502.bin.3.230
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114822124
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:53Z
INSDC statuspublic
Submitter IdMFD05502.bin.3.230
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score72.89
completeness softwareCheckM2
contamination score0.21
geographic location (latitude)55.77
geographic location (longitude)10.3164
local environmental contextTemperate heath
metagenomic sourcesoil metagenome
sample derived fromERS14381673
scientific_nameuncultured Microthrixaceae bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Microthrixaceae bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114822124
ID:
45978265

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