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MAG for uncultured Thermoleophilia bacterium

Identifiers
BioSample: SAMEA114821585; SRA: ERS17246452
Organism
uncultured Thermoleophilia bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Thermoleophilia; environmental samples
Attributes
broad-scale environmental contextCoastal
collection date2021-07-28
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD05442.bin.3.447
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114821585
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:52Z
INSDC statuspublic
Submitter IdMFD05442.bin.3.447
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score55.19
completeness softwareCheckM2
contamination score1.48
geographic location (latitude)56.7368
geographic location (longitude)8.822
local environmental contextSalt marshes and salt meadows
metagenomic sourcesoil metagenome
sample derived fromERS14381668
scientific_nameuncultured Thermoleophilia bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Thermoleophilia bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114821585
ID:
45981979

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