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MAG for uncultured Chloroflexia bacterium

Identifiers
BioSample: SAMEA114819506; SRA: ERS17244373
Organism
uncultured Chloroflexia bacterium
cellular organisms; Bacteria; Bacillati; Chloroflexota; Chloroflexia; environmental samples
Attributes
broad-scale environmental contextDunes
collection date2021-09-28
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD04935.bin.2.120
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114819506
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:45Z
INSDC statuspublic
Submitter IdMFD04935.bin.2.120
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score71.81
completeness softwareCheckM2
contamination score2.71
geographic location (latitude)55.3523
geographic location (longitude)8.4297
local environmental contextSea dunes
metagenomic sourcesoil metagenome
sample derived fromERS14381669
scientific_nameuncultured Chloroflexia bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Chloroflexia bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114819506
ID:
45985484

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