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MAG for uncultured Acidobacteriaceae bacterium

Identifiers
BioSample: SAMEA114819106; SRA: ERS17243974
Organism
uncultured Acidobacteriaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; Acidobacteriota; Terriglobia; Terriglobales; Acidobacteriaceae; environmental samples
Attributes
broad-scale environmental contextBogs, mires and fens
collection date2021-09-28
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD04780.bin.3.322
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114819106
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:44Z
INSDC statuspublic
Submitter IdMFD04780.bin.3.322
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score52.34
completeness softwareCheckM2
contamination score3.6
geographic location (latitude)57.1929
geographic location (longitude)9.7671
local environmental contextSphagnum acid bogs
metagenomic sourcesoil metagenome
sample derived fromERS14381688
scientific_nameuncultured Acidobacteriaceae bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Acidobacteriaceae bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114819106
ID:
45980022

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