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MAG for uncultured cyanobacterium

Identifiers
BioSample: SAMEA114818349; SRA: ERS17243216
Organism
uncultured cyanobacterium
cellular organisms; Bacteria; Bacillati; Cyanobacteriota/Melainabacteria group; Cyanobacteriota; environmental samples
Attributes
broad-scale environmental contextFreshwater
collection date2021-06-15
environmental mediumnot collected
geographic locationDenmark
isolation sourcesediment
project nameMicroflora Danica
sample nameMFD04716.bin.1.71
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114818349
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:41Z
INSDC statuspublic
Submitter IdMFD04716.bin.1.71
assembly qualitySingle contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score100
completeness softwareCheckM2
contamination score0
geographic location (latitude)57.7283
geographic location (longitude)10.6081
local environmental contextStanding freshwater
metagenomic sourcesediment metagenome
sample derived fromERS15928283
scientific_nameuncultured cyanobacterium
taxonomic identity markermulti-marker approach
Description

HQ MAG for uncultured cyanobacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114818349
ID:
45974108

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