MAG for uncultured candidate division WWE3 bacteri... - BioSample

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Result Filters

Organism: uncultured candidate division WWE3 bacterium
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; candidate division WWE3; environmental samples

Attributes

broad-scale environmental context	Freshwater
collection date	2021-06-15
environmental medium	not collected
geographic location	Denmark
isolation source	sediment
project name	Microflora Danica
sample name	MFD04716.bin.1.185
ENA first public	2024-12-25
ENA-CHECKLIST	ERC000011
External Id	SAMEA114818227
INSDC center name	Center for Microbial Communities
INSDC last update	2023-12-07T09:59:41Z
INSDC status	public
Submitter Id	MFD04716.bin.1.185
assembly quality	Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parameters	Ensemble iterative binning using coverage and kmer
binning software	MetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score	93.02
completeness software	CheckM2
contamination score	2.88
geographic location (latitude)	57.7283
geographic location (longitude)	10.6081
local environmental context	Standing freshwater
metagenomic source	sediment metagenome
sample derived from	ERS15928283
scientific_name	uncultured candidate division WWE3 bacterium
taxonomic identity marker	multi-marker approach

Description: HQ MAG for uncultured candidate division WWE3 bacterium, recovered from an environmental sample from Denmark

BioProject: PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project