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MAG for uncultured Acidobacteriota bacterium

Identifiers
BioSample: SAMEA114814343; SRA: ERS17239210
Organism
uncultured Acidobacteriota bacterium
cellular organisms; Bacteria; Pseudomonadati; Acidobacteriota; environmental samples
Attributes
broad-scale environmental contextGrassland formations
collection date2020-08-15
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD03399.bin.3.157
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114814343
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:29Z
INSDC statuspublic
Submitter IdMFD03399.bin.3.157
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score72.03
completeness softwareCheckM2
contamination score0.42
geographic location (latitude)57.18586
geographic location (longitude)9.77493
local environmental contextSemi-natural dry grasslands
metagenomic sourcesoil metagenome
sample derived fromERS14381603
scientific_nameuncultured Acidobacteriota bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Acidobacteriota bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114814343
ID:
45986089

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