MAG for uncultured Alphaproteobacteria bacterium

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Organism: uncultured Alphaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; environmental samples

Attributes

broad-scale environmental context	Saltwater
collection date	2022-06-15
environmental medium	not collected
geographic location	Denmark
isolation source	water
project name	Microflora Danica
sample name	MFD03250.bin.c.4
ENA first public	2024-12-25
ENA-CHECKLIST	ERC000011
External Id	SAMEA114814119
INSDC center name	Center for Microbial Communities
INSDC last update	2023-12-07T09:59:27Z
INSDC status	public
Submitter Id	MFD03250.bin.c.4
assembly quality	Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
binning parameters	Ensemble iterative binning using coverage and kmer
binning software	MetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score	90.68
completeness software	CheckM2
contamination score	0.05
geographic location (latitude)	55.677
geographic location (longitude)	11.0731
local environmental context	Harbours
metagenomic source	marine metagenome
sample derived from	ERS16252358
scientific_name	uncultured Alphaproteobacteria bacterium
taxonomic identity marker	multi-marker approach