MAG for uncultured Flavobacteriaceae bacterium

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Result Filters

Organism: uncultured Flavobacteriaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; environmental samples

Attributes

broad-scale environmental context	Saltwater
collection date	2022-06-15
environmental medium	not collected
geographic location	Denmark
isolation source	water
project name	Microflora Danica
sample name	MFD03250.bin.3.20
ENA first public	2024-12-25
ENA-CHECKLIST	ERC000011
External Id	SAMEA114814107
INSDC center name	Center for Microbial Communities
INSDC last update	2023-12-07T09:59:27Z
INSDC status	public
Submitter Id	MFD03250.bin.3.20
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parameters	Ensemble iterative binning using coverage and kmer
binning software	MetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score	68.56
completeness software	CheckM2
contamination score	4.28
geographic location (latitude)	55.677
geographic location (longitude)	11.0731
local environmental context	Harbours
metagenomic source	marine metagenome
sample derived from	ERS16252358
scientific_name	uncultured Flavobacteriaceae bacterium
taxonomic identity marker	multi-marker approach

Description: MQ MAG for uncultured Flavobacteriaceae bacterium, recovered from an environmental sample from Denmark

BioProject: PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project