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MAG for Methanotrichaceae archaeon

Identifiers
BioSample: SAMEA114813631; SRA: ERS17238498
Organism
Methanotrichaceae archaeon
cellular organisms; Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Methanomicrobia; Methanotrichales; Methanotrichaceae; unclassified Methanotrichaceae
Attributes
broad-scale environmental contextFreshwater
collection date2020-07-30
environmental mediumnot collected
geographic locationDenmark
isolation sourcesediment
project nameMicroflora Danica
sample nameMFD02979.bin.2.102
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114813631
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:24Z
INSDC statuspublic
Submitter IdMFD02979.bin.2.102
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score56.61
completeness softwareCheckM2
contamination score0.95
geographic location (latitude)56.323
geographic location (longitude)10.0517
local environmental contextStanding freshwater
metagenomic sourcesediment metagenome
sample derived fromERS14381601
scientific_nameMethanotrichaceae archaeon
taxonomic identity markermulti-marker approach
Description

MQ MAG for Methanotrichaceae archaeon, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114813631
ID:
45985032

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